Research on Nitrification and Related Processes, Part B

Content: 
Title Page
Page ii

Copyright
Page iv

Contributors
Pages xiii-xviii

Preface
Pages xix-xx
Lisa Yael Stein, Martin GГјnter Klotz

Contents of previous volume
Pages xxi-xlix

Chapter One - Strategies to Determine Diversity, Growth, and Activity of Ammonia-Oxidizing Archaea in Soil
Pages 3-34
Graeme W. Nicol, James I. Prosser

Chapter Two - Responses of Aerobic and Anaerobic Ammonia/Ammonium-Oxidizing Microorganisms to Anthropogenic Pollution in Coastal Marine Environments
Pages 35-62
Huiluo Cao, Meng Li, Hongyue Dang, Ji-Dong Gu

Chapter Three - Molecular and Stable Isotope Methods to Detect and Measure Anaerobic Ammonium Oxidation (Anammox) in Aquatic Ecosystems
Pages 63-89
Bongkeun Song, Craig R. Tobias

Chapter Four - Nitrogen Mineralization and Assimilation at Millimeter Scales
Pages 91-114
David D. Myrold, Jennifer Pett-Ridge, Peter J. Bottomley

Chapter Five - Measurement of Carbon Dioxide, Methane, Nitrous oxide, and Water Potential in Soil Ecosystems
Pages 115-137
Martin E. Brummell, Steven D. Siciliano

Chapter Six - Source Determination of Nitrous Oxide Based on Nitrogen and Oxygen Isotope Tracing: Dealing with Oxygen Exchange
Pages 139-160
Dorien M. Kool, Jan Willem Van Groenigen, Nicole Wrage

Chapter Seven - A Polyphasic Approach to Study Ecophysiology of Complex Multispecies Nitrifying Biofilms
Pages 163-184
Satoshi Okabe, Hisashi Satoh, Tomonori Kindaichi

Chapter Eight - In Situ Techniques and Digital Image Analysis Methods for Quantifying Spatial Localization Patterns of Nitrifiers and Other Microorganisms in Biofilm and Flocs
Pages 185-215
Holger Daims, Michael Wagner

Chapter Nine - Investigating Nitrosomonas europaea Stress Biomarkers in Batch, Continuous Culture, and Biofilm Reactors
Pages 217-246
Tyler S. Radniecki, Ellen G. Lauchnor

Chapter Ten - Nitrification of Raw or Used Water Using Expanded Bed Biofilm Reactor Technology
Pages 247-267
M.J. Dempsey

Chapter Eleven - Ammonia-Oxidizing Bacteria in Wastewater
Pages 269-286
Micol Bellucci, Thomas P. Curtis

Chapter Twelve - Genomics for Key Players in the N Cycle: From Guinea Pigs to the Next Frontier
Pages 289-318
Patrick S.G. Chain, Gary Xie, Shawn R. Starkenburg, Matthew B. Scholz, Nicholas Beckloff, Chien-Chi Lo, Karen W. Davenport, Krista G. Reitenga, Hajnalka E. Daligault, J. Chris Detter, Tracey A.K. Freitas, Cheryl D. Gleasner, Lance D. Green, Cliff S. Han, Kim K. McMurry, Linda J. Meincke, Xiaohong Shen, Ahmet Zeytun

Chapter Thirteen - Preparation of High-Molecular Weight DNA and Metagenomic Libraries from Soils and Hot Springs
Pages 319-344
Laila J. Reigstad, Rita Bartossek, Christa Schleper

Chapter Fourteen - Characterizing Bacterial Gene Expression in Nitrogen Cycle Metabolism with RT-qPCR
Pages 345-372
James E. Graham, Nicholas B. Wantland, Mark Campbell, Martin G. Klotz

Chapter Fifteen - The Utility of Functional Gene Arrays for Assessing Community Composition, Relative Abundance, and Distribution of Ammonia-Oxidizing Bacteria and Archaea
Pages 373-396
B.B. Ward, N.J. Bouskill

Chapter Sixteen - Structure and Function of Formate-Dependent Cytochrome c Nitrite Reductase, NrfA
Pages 399-422
Oliver Einsle

Chapter Seventeen - Detection and Characterization of a Multicopper Oxidase from Nitrosomonas europaea
Pages 423-433
Thomas J. Lawton, Amy C. Rosenzweig

Chapter Eighteen - Assessing Variability in Gel-Based Proteomic Analysis of Nitrosomonas europaea
Pages 435-463
Emily O. Burton, William J. Hickey

Chapter Nineteen - Nitrogen Metabolism and Kinetics of Ammonia-Oxidizing Archaea
Pages 465-487
Willm Martens-Habbena, David A. Stahl

Author Index
Pages 489-514

Subject Index
Pages 515-524