Research in Computational Molecular Biology: 21st Annual International Conference, RECOMB 2017, Hong Kong, China, May 3-7, 2017, Proceedings

Front Matter....Pages I-XIV
Boosting Alignment Accuracy by Adaptive Local Realignment....Pages 1-17
A Concurrent Subtractive Assembly Approach for Identification of Disease Associated Sub-metagenomes....Pages 18-33
A Flow Procedure for the Linearization of Genome Sequence Graphs....Pages 34-49
Dynamic Alignment-Free and Reference-Free Read Compression....Pages 50-65
A Fast Approximate Algorithm for Mapping Long Reads to Large Reference Databases....Pages 66-81
Determining the Consistency of Resolved Triplets and Fan Triplets....Pages 82-98
Progressive Calibration and Averaging for Tandem Mass Spectrometry Statistical Confidence Estimation: Why Settle for a Single Decoy?....Pages 99-116
Resolving Multicopy Duplications de novo Using Polyploid Phasing....Pages 117-133
A Bayesian Active Learning Experimental Design for Inferring Signaling Networks....Pages 134-156
Superbubbles, Ultrabubbles and Cacti....Pages 157-172
EPR-Dictionaries: A Practical and Fast Data Structure for Constant Time Searches in Unidirectional and Bidirectional FM Indices....Pages 173-189
A Bayesian Framework for Estimating Cell Type Composition from DNA Methylation Without the Need for Methylation Reference....Pages 190-206
Towards Recovering Allele-Specific Cancer Genome Graphs....Pages 207-223
Using Stochastic Approximation Techniques to Efficiently Construct Confidence Intervals for Heritability....Pages 224-240
Improved Search of Large Transcriptomic Sequencing Databases Using Split Sequence Bloom Trees....Pages 241-256
AllSome Sequence Bloom Trees....Pages 257-271
Longitudinal Genotype-Phenotype Association Study via Temporal Structure Auto-learning Predictive Model....Pages 272-286
Improving Imputation Accuracy by Inferring Causal Variants in Genetic Studies....Pages 287-302
The Copy-Number Tree Mixture Deconvolution Problem and Applications to Multi-sample Bulk Sequencing Tumor Data....Pages 303-317
Quantifying the Impact of Non-coding Variants on Transcription Factor-DNA Binding....Pages 318-335
aBayesQR: A Bayesian Method for Reconstruction of Viral Populations Characterized by Low Diversity....Pages 336-352
Back Matter....Pages 353-369
....Pages 370-406