Pattern Recognition in Bioinformatics: 7th IAPR International Conference, PRIB 2012, Tokyo, Japan, November 8-10, 2012. Proceedings

Front Matter....Pages -
Robust Community Detection Methods with Resolution Parameter for Complex Detection in Protein Protein Interaction Networks....Pages 1-13
Machine Learning Scoring Functions Based on Random Forest and Support Vector Regression....Pages 14-25
A Genetic Algorithm for Scale-Based Translocon Simulation....Pages 26-37
A Framework of Gene Subset Selection Using Multiobjective Evolutionary Algorithm....Pages 38-48
Multiple Tree Alignment with Weights Applied to Carbohydrates to Extract Binding Recognition Patterns....Pages 49-58
A Unified Adaptive Co-identification Framework for High-D Expression Data....Pages 59-70
Protein Clustering on a Grassmann Manifold....Pages 71-81
Improving the Portability and Performance of jViz.RNA – A Dynamic RNA Visualization Software....Pages 82-93
A Novel Machine Learning Approach for Detecting the Brain Abnormalities from MRI Structural Images....Pages 94-105
An Open Framework for Extensible Multi-stage Bioinformatics Software....Pages 106-117
An Algorithm to Assemble Gene-Protein-Reaction Associations for Genome-Scale Metabolic Model Reconstruction....Pages 118-128
A Machine Learning and Chemometrics Assisted Interpretation of Spectroscopic Data – A NMR-Based Metabolomics Platform for the Assessment of Brazilian Propolis....Pages 129-140
Principal Component Analysis for Bacterial Proteomic Analysis....Pages 141-152
Application of the Multi-modal Relevance Vector Machine to the Problem of Protein Secondary Structure Prediction....Pages 153-165
Cascading Discriminant and Generative Models for Protein Secondary Structure Prediction....Pages 166-177
Improvement of the Protein–Protein Docking Prediction by Introducing a Simple Hydrophobic Interaction Model: An Application to Interaction Pathway Analysis....Pages 178-187
Representation of Protein Secondary Structure Using Bond-Orientational Order Parameters....Pages 188-197
Diagnose the Premalignant Pancreatic Cancer Using High Dimensional Linear Machine....Pages 198-209
Predicting V(D)J Recombination Using Conditional Random Fields....Pages 210-221
A Simple Genetic Algorithm for Biomarker Mining....Pages 222-232
Finding Conserved Regions in Protein Structures Using Support Vector Machines and Structure Alignment....Pages 233-242
Aligning Discovered Patterns from Protein Family Sequences....Pages 243-254
Application of the Burrows-Wheeler Transform for Searching for Approximate Tandem Repeats....Pages 255-266
Pattern Recognition for Subfamily Level Classification of GPCRs Using Motif Distillation and Distinguishing Power Evaluation....Pages 267-276
Back Matter....Pages -