Biomembranes Part O: Protons and Water: Structure and Translocation

Content: 
Editorial Board
Page iii

Contributors to volume 127
Pages ix-xii

Preface
Page xiii
Lester Packer

Volumes in series
Pages xv,xvii-xxvii

[1] Methods to determine structure in water and aqueous solutions Original Research Article
Pages 3-21
Harold L. Friedman

[2] Structural chemistry of biomolecular hydration via computer simulation: The proximity criterion Original Research Article
Pages 21-47
Mihaly Mezei, David L. Beveridge

[3] Theoretical and computational studies of hydrophobic interactions Original Research Article
Pages 48-63
Lawrence R. Pratt, David Chandler

[4] Theoretical methods for obtaining free energies of biomolecular equilibria in aqueous solutions Original Research Article
Pages 64-78
Andrew Pohorille, Lawrence R. Pratt

[5] Proton tunneling Original Research Article
Pages 79-91
Akinori Sarai, Don DeVault

[6] Low-frequency raman scattering from water and aqueous solutions: A direct measure of hydrogen bonding Original Research Article
Pages 91-105
G.E. Walrafen, M.R. Fisher

[7] Vibrational methods for water structure in nonpolar media Original Research Article
Pages 106-113
Herbert L. Strauss

[8] Simulations of complex chemical systems Original Research Article
Pages 114-140
Enrico Clementi

[9] Calorimetric methods for measurement of interactions of biomolecules with water Original Research Article
Pages 141-150
Gordon C. Kresheck

[10] Nuclear magnetic resonance study of water interactions with proteins, biomolecules, membranes, and tissues Original Research Article
Pages 151-161
B.M. Fung

[11] Determination of water structure around biomolecules using x-ray and neutron diffraction methods Original Research Article
Pages 162-183
Hugh Savage, Alexander Wlodawer

[12] Orientation of amino acid side chains: Intraprotein and solvent interactions Original Research Article
Pages 183-196
George NГ©methy

[13] Correlation of protein dynamics with water mobility: Mössbauer spectroscopy and microwave absorption methods Original Research Article
Pages 196-206
Fritz Parak

[14] Protein dynamics and hydration Original Research Article
Pages 207-216
Hans Frauenfelder, Enrico Gratton

[15] Quantitation of water in membranes by neutron diffraction and x-ray techniques Original Research Article
Pages 217-229
R.B. Knott, B.P. Schoenborn

[16] Artemia cysts as a model for the study of water in biological systems Original Research Article
Pages 230-239
James S. Clegg

[17] Determining intracellular viscosity from the rotational motion of spin labels Original Research Article
Pages 239-249
Philip D. Morse II

[18] Computation of energy profiles in the gramicidin A channel Original Research Article
Pages 250-263
Alberte Pullman

[19] Proton movements in inorganic materials Original Research Article
Pages 263-284
J.B. Goodenough

[20] Solid-phase protein hydration studies Original Research Article
Pages 284-293
Philip L. Poole, John L. Finney

[21] Antifreeze glycopeptides and peptides: Interactions with ice and water Original Research Article
Pages 293-303
Arthur L. DeVries

[22] Methods for the study of water in ice phases Original Research Article
Pages 303-318
W.F. Kuhs

[23] Diffraction techniques for the study of pure water and aqueous solutions Original Research Article
Pages 319-328
J.E. Enderby, G.W. Neilson

[24] A method of solvent structure analysis for proteins using D2Oо—ёH2O neutron difference maps Original Research Article
Pages 329-342
Joseph Shpungin, Anthony a. Kossiakoff

[25] Fourier transform infrared studies of an active proton transport pump Original Research Article
Pages 343-353
Kenneth J. Rothschild

[26] Direct methods for measuring conformational water forces (hydration forces) between membrane and other surfaces Original Research Article
Pages 353-360
Jacob Israelachvili, Johan Marra

[27] Cell water viscosity Original Research Article
Pages 360-369
Alec D. Keith, Andrea M. Mastro

[28] Theoretical approaches to solvation of biopolymers Original Research Article
Pages 369-400
Charles L. Brooks III, Martin Karplus

[29] Osmotic stress for the direct measurement of intermolecular forces Original Research Article
Pages 400-416
V.A. Parsegian, R.P. Rand, N.L. Fuller, D.C. Rau

[30] Proton conduction through proteins: An overview of theoretical principles and applications Original Research Article
Pages 419-438
Z. Schulten, K. Schulten

[31] Proton polarizability of hydrogen bonds: Infrared methods, relevance to electrochemical and biological systems Original Research Article
Pages 439-455
George Zundel

[32] Theoretical calculation of energetics of proton Translocation through membranes Original Research Article
Pages 456-465
Steve Sheiner

[33] Barrier models for the description of proton transport across membranes Original Research Article
Pages 465-471
P. Läuger

[34] Proton permeation through model membranes Original Research Article
Pages 471-480
David W. Dreamer, John Gutknecht

[35] Lipid phase transitions: Water and proton permeability Original Research Article
Pages 480-486
Alfred Blume

[36] Planar bilayers: A powerful tool to study membrane proteins involved in ion transport Original Research Article
Pages 486-502
Alberto Darszon

[37] Electron paramagnetic resonance methods for measuring H+/OHв€’ fluxes across phospholipid vesicles Original Research Article
Pages 502-510
David S. Cafiso

[38] Depth of water penetration into lipid bilayers Original Research Article
Pages 511-521
S.A. Simon, T.J. McIntosh

[39] Application of the laser-induced proton pulse for measuring the protonation rate constants of specific sites on proteins and membranes Original Research Article
Pages 522-538
Menachem Gutman

[40] Localized protonic coupling: Overview and critical evaluation of techniques Original Research Article
Pages 538-557
Douglas B. Kell

[41] Methods for the determination of membrane potential in bioenergetic systems Original Research Article
Pages 557-577
J. Baz. Jackson, David G. Nicholls

[42] Correlation between the structure and efficiency of light-induced proton pumps Original Research Article
Pages 578-587
A.W. Warshel

[43] Resonance raman methods for proton translocation in bacteriorhodopsin Original Research Article
Pages 587-597
Mark S. Braiman

[44] Water channels Original Research Article
Pages 598-609
Robert I. Macey, Teresa Moura

[45] Displacement current in proteins as a measure of proton movements: Bacteriorhodopsin Original Research Article
Pages 610-618
Lajos Keszthelyi

[46] Measurement of density and location of solvent associated with biomolecules by small-angle neutron scattering Original Research Article
Pages 619-629
Giuseppe Zaccai

[47] Use of hydrogen exchange kinetics in the study of the dynamic properties of biological membranes Original Research Article
Pages 630-648
Andreas Rosenberg

[48] Bacteriorhodopsin: Fourier transform infrared methods for studies of protonation of carboxyl groups Original Research Article
Pages 649-662
Gavin Dollinger, Laura Eisenstein, Shuo-Liang Lin, Koji Nakanishi, Kazunori Odashima, John Termini

[49] Deuteration as a tool in investigating the role of water in the structure and function of excitable membranes Original Research Article
Pages 662-678
V. Vasilescu, Eva Katona

[50] Spectroscopic methods for the determination of membrane surface charge density Original Research Article
Pages 678-696
Benjamin Ehrenberg

[51] Water and carbohydrate interactions with membranes: Studies with infrared spectroscopy and differential scanning calorimetry methods Original Research Article
Pages 696-703
John H. Crowe, Lois M. Crowe

[52] Freeze-fracture methods: Preparation of complementary replicas for evaluating intracellular ice damage in ultrarapidly cooled specimens Original Research Article
Pages 704-718
M. Joseph Costello, Richard D. Fetter

[53] Electron microscopy of frozen hydrated specimens: Preparation and characteristics Original Research Article
Pages 719-730
Jean Lepault, Jacques Dubochet

[54] Bacterial nucleation of ice in plant leaves Original Research Article
Pages 730-738
Susan S. Hirano, Christen D. Upper

[55] Measurement of transmembrane proton movements with nitroxide spin probes Original Research Article
Pages 738-745
Rolf J. Mehlhorn, Lester Packer, Robert Macey, Alexandru T. Balaban, Ileana Dragutan

[56] Determination of the net proton-hydroxide ion permeability across vesicular lipid bilayers and membrane proteins by optical probes Original Research Article
Pages 746-760
Norbert A. Dencher, Petra A. Burghaus, Stephan Grzesiek

[57] Methods to study the freezing process in plants Original Research Article
Pages 761-771
C.B. Rajashekar, M.J. Burke

[58] Reconstitution of an H+ translocator, the “uncoupling protein” from brown adipose tissue mitochondria, in phospholipid vesicles Original Research Article
Pages 772-779
Martin Klingenberg, Edith Winkler

Author index
Pages 781-810

Subject index
Pages 811-830