Advances in Bioinformatics: 4th International Workshop on Practical Applications of Computational Biology and Bioinformatics 2010 (IWPACBB 2010)

Front Matter....Pages -
Highlighting Differential Gene Expression between Two Condition Microarrays through Heterogeneous Genomic Data: Application to Lesihmania infantum Stages Comparison....Pages 1-8
An Experimental Evaluation of a Novel Stochastic Method for Iterative Class Discovery on Real Microarray Datasets....Pages 9-16
Automatic Workflow during the Reuse Phase of a CBP System Applied to Microarray Analysis....Pages 17-24
A Comparative Study of Microarray Data Classification Methods Based on Ensemble Biological Relevant Gene Sets....Pages 25-32
Predicting the Start of Protein α -Helices Using Machine Learning Algorithms....Pages 33-41
A Data Mining Approach for the Detection of High-Risk Breast Cancer Groups....Pages 43-51
GRASP for Instance Selection in Medical Data Sets....Pages 53-60
Expanding Gene-Based PubMed Queries....Pages 61-68
Improving Cross Mapping in Biomedical Databases....Pages 69-76
An Efficient Multi-class Support Vector Machine Classifier for Protein Fold Recognition....Pages 77-84
Feature Selection Using Multi-Objective Evolutionary Algorithms: Application to Cardiac SPECT Diagnosis....Pages 85-92
Two Results on Distances for Phylogenetic Networks....Pages 93-100
Cramér Coefficient in Genome Evolution....Pages 101-107
An Application for Studying Tandem Repeats in Orthologous Genes....Pages 109-115
Accurate Selection of Models of Protein Evolution....Pages 117-121
Scalable Phylogenetics through Input Preprocessing....Pages 123-130
The Median of the Distance between Two Leaves in a Phylogenetic Tree....Pages 131-135
 In Silico AFLP: An Application to Assess What Is Needed to Resolve a Phylogeny....Pages 137-141
Employing Compact Intra-genomic Language Models to Predict Genomic Sequences and Characterize Their Entropy....Pages 143-150
Structure Based Design of Potential Inhibitors of Steroid Sulfatase....Pages 151-156
Agent-Based Model of the Endocrine Pancreas and Interaction with Innate Immune System....Pages 157-164
State-of-the-Art Genetic Programming for Predicting Human Oral Bioavailability of Drugs....Pages 165-173
Pharmacophore-Based Screening as a Clue for the Discovery of New P-Glycoprotein Inhibitors....Pages 175-180
 e -BiMotif: Combining Sequence Alignment and Biclustering to Unravel Structured Motifs....Pages 181-191
Applying a Metabolic Footprinting Approach to Characterize the Impact of the Recombinant Protein Production in Escherichia coli ....Pages 193-200
Rbbt: A Framework for Fast Bioinformatics Development with Ruby....Pages 201-208
Analysis of the Effect of Reversibility Constraints on the Predictions of Genome-Scale Metabolic Models....Pages 209-215
Enhancing Elementary Flux Modes Analysis Using Filtering Techniques in an Integrated Environment....Pages 217-224
Genome Visualization in Space....Pages 225-232
A Hybrid Scheme to Solve the Protein Structure Prediction Problem....Pages 233-240
Back Matter....Pages -