Supercomputing: 4th Russian Supercomputing Days, RuSCDays 2018, Moscow, Russia, September 24–25, 2018, Revised Selected Papers

Front Matter ....Pages I-XVIII
Front Matter ....Pages 1-1
 A Parallel Algorithm for Studying the Ice Cover Impact onto Seismic Waves Propagation in the Shallow Arctic Waters  (Galina Reshetova, Vladimir Cheverda, Vadim Lisitsa, Valery Khaidykov)....Pages 3-14
 An Efficient Parallel Algorithm for Numerical Solution of Low Dimension Dynamics Problems  (Stepan Orlov, Alexey Kuzin, Nikolay Shabrov)....Pages 15-28
 Analysis of Means of Simulation Modeling of Parallel Algorithms  (D. V. Weins, B. M. Glinskiy, I. G. Chernykh)....Pages 29-39
 Block Lanczos-Montgomery Method over Large Prime Fields with GPU Accelerated Dense Operations  (Nikolai Zamarashkin, Dmitry Zheltkov)....Pages 40-49
 Comparison of Dimensionality Reduction Schemes for Parallel Global Optimization Algorithms  (Konstantin Barkalov, Vladislav Sovrasov, Ilya Lebedev)....Pages 50-62
 Efficiency Estimation for the Mathematical Physics Algorithms for Distributed Memory Computers  (Igor Konshin)....Pages 63-75
 Extremely High-Order Optimized Multioperators-Based Schemes and Their Applications to Flow Instabilities and Sound Radiation  (Andrei Tolstykh, Michael Lipavskii, Dmitrii Shirobokov, Eugenii Chigerev)....Pages 76-87
 GPU-Based Parallel Computations in Multicriterial Optimization  (Victor Gergel, Evgeny Kozinov)....Pages 88-100
 LRnLA Algorithm ConeFold with Non-local Vectorization for LBM Implementation  (Anastasia Perepelkina, Vadim Levchenko)....Pages 101-113
 Numerical Method for Solving a Diffraction Problem of Electromagnetic Wave on a System of Bodies and Screens  (Mikhail Medvedik, Marina Moskaleva, Yury Smirnov)....Pages 114-124
 Parallel Algorithm for One-Way Wave Equation Based Migration for Seismic Imaging  (Alexander Pleshkevich, Dmitry Vishnevsky, Vadim Lisitsa, Vadim Levchenko)....Pages 125-135
 Parallel Simulation of Community-Wide Information Spreading in Online Social Networks  (Sergey Kesarev, Oksana Severiukhina, Klavdiya Bochenina)....Pages 136-148
 Technique for Teaching Parallel Programming via Solving a Computational Electrodynamics Problems  (Sergey Mosin, Nikolai Pleshchinskii, Ilya Pleshchinskii, Dmitrii Tumakov)....Pages 149-158
 The Algorithm for Transferring a Large Number of Radionuclide Particles in a Parallel Model of Ocean Hydrodynamics  (Vladimir Bibin, Rashit Ibrayev, Maxim Kaurkin)....Pages 159-170
Front Matter ....Pages 171-171
 Aerodynamic Models of Complicated Constructions Using Parallel Smoothed Particle Hydrodynamics  (Alexander Titov, Sergey Khrapov, Victor Radchenko, Alexander Khoperskov)....Pages 173-184
 Ballistic Resistance Modeling of Aramid Fabric with Surface Treatment  (Natalia Yu. Dolganina, Anastasia V. Ignatova, Alexandra A. Shabley, Sergei B. Sapozhnikov)....Pages 185-194
 CardioModel – New Software for Cardiac Electrophysiology Simulation  (Valentin Petrov, Sergey Lebedev, Anna Pirova, Evgeniy Vasilyev, Alexander Nikolskiy, Vadim Turlapov et al.)....Pages 195-207
 Examination of Clastic Oil and Gas Reservoir Rock Permeability Modeling by Molecular Dynamics Simulation Using High-Performance Computing  (Vladimir Berezovsky, Marsel Gubaydullin, Alexander Yur’ev, Ivan Belozerov)....Pages 208-217
 Hybrid Codes for Atomistic Simulations on the Desmos Supercomputer: GPU-acceleration, Scalability and Parallel I/O  (Nikolay Kondratyuk, Grigory Smirnov, Vladimir Stegailov)....Pages 218-229
 INMOST Parallel Platform for Mathematical Modeling and Applications  (Kirill Terekhov, Yuri Vassilevski)....Pages 230-241
 Maximus: A Hybrid Particle-in-Cell Code for Microscopic Modeling of Collisionless Plasmas  (Julia Kropotina, Andrei Bykov, Alexandre Krassilchtchikov, Ksenia Levenfish)....Pages 242-253
 Microwave Radiometry of Atmospheric Precipitation: Radiative Transfer Simulations with Parallel Supercomputers  (Yaroslaw Ilyushin, Boris Kutuza)....Pages 254-265
 Modeling Groundwater Flow in Unconfined Conditions of Variable Density Solutions in Dual-Porosity Media Using the GeRa Code  (Ivan Kapyrin, Igor Konshin, Vasily Kramarenko, Fedor Grigoriev)....Pages 266-278
 New QM/MM Implementation of the MOPAC2012 in the GROMACS  (Arthur O. Zalevsky, Roman V. Reshetnikov, Andrey V. Golovin)....Pages 279-288
 Orlando Tools: Energy Research Application Development Through Convergence of Grid and Cloud Computing  (Alexander Feoktistov, Sergei Gorsky, Ivan Sidorov, Roman Kostromin, Alexei Edelev, Lyudmila Massel)....Pages 289-300
 Parallel FDTD Solver with Static and Dynamic Load Balancing  (Gleb Balykov)....Pages 301-313
 Parallel Supercomputer Docking Program of the New Generation: Finding Low Energy Minima Spectrum  (Alexey Sulimov, Danil Kutov, Vladimir Sulimov)....Pages 314-330
 Parallelization Strategy for Wavefield Simulation with an Elastic Iterative Solver  (Mikhail Belonosov, Vladimir Cheverda, Victor Kostin, Dmitry Neklyudov)....Pages 331-342
 Performance of Time and Frequency Domain Cluster Solvers Compared to Geophysical Applications  (Victor Kostin, Sergey Solovyev, Andrey Bakulin, Maxim Dmitriev)....Pages 343-353
 Population Annealing and Large Scale Simulations in Statistical Mechanics  (Lev Shchur, Lev Barash, Martin Weigel, Wolfhard Janke)....Pages 354-366
 Simulation and Optimization of Aircraft Assembly Process Using Supercomputer Technologies  (Tatiana Pogarskaia, Maria Churilova, Margarita Petukhova, Evgeniy Petukhov)....Pages 367-378
 SL-AV Model: Numerical Weather Prediction at Extra-Massively Parallel Supercomputer  (Mikhail Tolstykh, Gordey Goyman, Rostislav Fadeev, Vladimir Shashkin, Sergei Lubov)....Pages 379-387
 Supercomputer Simulation Study of the Convergence of Iterative Methods for Solving Inverse Problems of 3D Acoustic Tomography with the Data on a Cylindrical Surface  (Sergey Romanov)....Pages 388-400
 Supercomputer Technology for Ultrasound Tomographic Image Reconstruction: Mathematical Methods and Experimental Results  (Alexander Goncharsky, Sergey Seryozhnikov)....Pages 401-413
 The Parallel Hydrodynamic Code for Astrophysical Flow with Stellar Equations of State  (Igor Kulikov, Igor Chernykh, Vitaly Vshivkov, Vladimir Prigarin, Vladimir Mironov, Alexander Tutukov)....Pages 414-426
 Three-Dimensional Simulation of Stokes Flow Around a Rigid Structure Using FMM/GPU Accelerated BEM  (Olga A. Abramova, Yulia A. Pityuk, Nail A. Gumerov, Iskander Sh. Akhatov)....Pages 427-438
 Using of Hybrid Cluster Systems for Modeling of a Satellite and Plasma Interaction by the Molecular Dynamics Method  (Leonid Zinin, Alexander Sharamet, Sergey Ishanov)....Pages 439-449
Front Matter ....Pages 451-451
 Adaptive Scheduling for Adjusting Retrieval Process in BOINC-Based Virtual Screening  (Natalia Nikitina, Evgeny Ivashko)....Pages 453-464
 Advanced Vectorization of PPML Method for Intel® Xeon® Scalable Processors  (Igor Chernykh, Igor Kulikov, Boris Glinsky, Vitaly Vshivkov, Lyudmila Vshivkova, Vladimir Prigarin)....Pages 465-471
 Analysis of Results of the Rating of Volunteer Distributed Computing Projects  (Vladimir N. Yakimets, Ilya I. Kurochkin)....Pages 472-486
 Application of the LLVM Compiler Infrastructure to the Program Analysis in SAPFOR  (Nikita Kataev)....Pages 487-499
 Batch of Tasks Completion Time Estimation in a Desktop Grid  (Evgeny Ivashko, Valentina Litovchenko)....Pages 500-510
 BOINC-Based Branch-and-Bound  (Andrei Ignatov, Mikhail Posypkin)....Pages 511-522
 Comprehensive Collection of Time-Consuming Problems for Intensive Training on High Performance Computing  (Iosif Meyerov, Sergei Bastrakov, Alexander Sysoyev, Victor Gergel)....Pages 523-530
 Dependable and Coordinated Resources Allocation Algorithms for Distributed Computing  (Victor Toporkov, Dmitry Yemelyanov)....Pages 531-542
 Deploying Elbrus VLIW CPU Ecosystem for Materials Science Calculations: Performance and Problems  (Vladimir Stegailov, Alexey Timofeev)....Pages 543-553
 Design Technology for Reconfigurable Computer Systems with Immersion Cooling  (Ilya Levin, Alexey Dordopulo, Alexander Fedorov, Yuriy Doronchenko)....Pages 554-564
 Designing a Parallel Programs on the Base of the Conception of Q-Determinant  (Valentina Aleeva)....Pages 565-577
 Enumeration of Isotopy Classes of Diagonal Latin Squares of Small Order Using Volunteer Computing  (Eduard Vatutin, Alexey Belyshev, Stepan Kochemazov, Oleg Zaikin, Natalia Nikitina)....Pages 578-586
 Interactive 3D Representation as a Method of Investigating Information Graph Features  (Alexander Antonov, Nikita Volkov)....Pages 587-598
 On Sharing Workload in Desktop Grids  (Ilya Chernov)....Pages 599-608
 On-the-Fly Calculation of Performance Metrics with Adaptive Time Resolution for HPC Compute Jobs  (Konstantin Stefanov, Vadim Voevodin)....Pages 609-619
 Residue Logarithmic Coprocessor for Mass Arithmetic Computations  (Ilya Osinin)....Pages 620-630
 Supercomputer Efficiency: Complex Approach Inspired by Lomonosov-2 History Evaluation  (Sergei Leonenkov, Sergey Zhumatiy)....Pages 631-640
 Supercomputer Real-Time Experimental Data Processing: Technology and Applications  (Vladislav A. Shchapov, Alexander M. Pavlinov, Elena N. Popova, Andrei N. Sukhanovskii, Stanislav L. Kalyulin, Vladimir Ya. Modorskii)....Pages 641-652
 The Conception, Requirements and Structure of the Integrated Computational Environment  (V. P. Il’in)....Pages 653-665
 The Elbrus-4C Based Node as Part of Heterogeneous Cluster for Oil and Gas Processing Researches  (Ekaterina Tyutlyaeva, Igor Odintsov, Alexander Moskovsky, Sergey Konyukhov, Alexander Kalyakin, Murad I. Neiman-zade)....Pages 666-674
 The Multi-level Adaptive Approach for Efficient Execution of Multi-scale Distributed Applications with Dynamic Workload  (Denis Nasonov, Nikolay Butakov, Michael Melnik, Alexandr Visheratin, Alexey Linev, Pavel Shvets et al.)....Pages 675-686
 Using Resources of Supercomputing Centers with Everest Platform  (Sergey Smirnov, Oleg Sukhoroslov, Vladimir Voloshinov)....Pages 687-698
Back Matter ....Pages 699-701