Shape in Medical Imaging: International Workshop, ShapeMI 2018, Held in Conjunction with MICCAI 2018, Granada, Spain, September 20, 2018, Proceedings

Front Matter ....Pages I-XII
Front Matter ....Pages 1-1
 Deformetrica 4: An Open-Source Software for Statistical Shape Analysis  (Alexandre Bône, Maxime Louis, Benoît Martin, Stanley Durrleman)....Pages 3-13
 On the Evaluation and Validation of Off-the-Shelf Statistical Shape Modeling Tools: A Clinical Application  (Anupama Goparaju, Ibolya Csecs, Alan Morris, Evgueni Kholmovski, Nassir Marrouche, Ross Whitaker et al.)....Pages 14-27
 Characterizing Anatomical Variability and Alzheimer’s Disease Related Cortical Thinning in the Medial Temporal Lobe Using Graph-Based Groupwise Registration and Point Set Geodesic Shooting  (Long Xie, Laura E. M. Wisse, Sandhitsu R. Das, Ranjit Ittyerah, Jiancong Wang, David A. Wolk et al.)....Pages 28-37
 Interpretable Spiculation Quantification for Lung Cancer Screening  (Wookjin Choi, Saad Nadeem, Sadegh Riyahi, Joseph O. Deasy, Allen Tannenbaum, Wei Lu)....Pages 38-48
 Shape and Facet Analyses of Alveolar Airspaces of the Lung  (Roman Grothausmann, Christian Mühlfeld, Matthias Ochs, Lars Knudsen)....Pages 49-64
 SlicerSALT: Shape AnaLysis Toolbox  (Jared Vicory, Laura Pascal, Pablo Hernandez, James Fishbaugh, Juan Prieto, Mahmoud Mostapha et al.)....Pages 65-72
 3D Shape Analysis for Coarctation of the Aorta  (Lina Gundelwein, Heiko Ramm, Leonid Goubergrits, Marcus Kelm, Hans Lamecker)....Pages 73-77
 Morphometric Sex Estimation from the Hip Bone by Means of the HIP 1.1 Software  (Miroslav Králík, Ondřej Klíma, Petra Urbanová, Lenka Polcerová, Martin Čuta)....Pages 78-89
Front Matter ....Pages 91-91
 Deformable Cubic Hermite Mesh Templates for Statistical Liver Shape Analysis  (Hao Bo Yu, Yui Nakagawa, Harvey Ho, Atsushi Saito, Akinobu Shimizu)....Pages 93-101
 Global Divergences Between Measures: From Hausdorff Distance to Optimal Transport  (Jean Feydy, Alain Trouvé)....Pages 102-115
 Parallel Transport of Surface Deformations from Pole Ladder to Symmetrical Extension  (Shuman Jia, Nicolas Duchateau, Pamela Moceri, Maxime Sermesant, Xavier Pennec)....Pages 116-124
 4D Continuous Medial Representation Trajectory Estimation for Longitudinal Shape Analysis  (Sungmin Hong, James Fishbaugh, Guido Gerig)....Pages 125-136
 Probabilistic Fitting of Active Shape Models  (Andreas Morel-Forster, Thomas Gerig, Marcel Lüthi, Thomas Vetter)....Pages 137-146
 Automatic Extraction of a Piecewise Symmetry Surface of a 3D Mesh: Application to Scoliosis  (Marion Morand, Olivier Comas, Gérard Subsol, Christophe Fiorio)....Pages 147-159
 Image Registration and Predictive Modeling: Learning the Metric on the Space of Diffeomorphisms  (Ayagoz Mussabayeva, Alexey Kroshnin, Anvar Kurmukov, Yulia Denisova, Li Shen, Shan Cong et al.)....Pages 160-168
 Joint Registration of Multiple Generalized Point Sets  (Zhe Min, Jiaole Wang, Max Q.-H. Meng)....Pages 169-177
 OCT Segmentation: Integrating Open Parametric Contour Model of the Retinal Layers and Shape Constraint to the Mumford-Shah Functional  (Jinming Duan, Weicheng Xie, Ryan Wen Liu, Christopher Tench, Irene Gottlob, Frank Proudlock et al.)....Pages 178-188
 Segmenting Bones Using Statistical Shape Modeling and Local Template Matching  (Elham Taghizadeh, Alexandre Terrier, Fabio Becce, Alain Farron, Philippe Büchler)....Pages 189-194
 Shape Analysis of White Matter Tracts via the Laplace-Beltrami Spectrum  (Lindsey Kitchell, Daniel Bullock, Soichi Hayashi, Franco Pestilli)....Pages 195-206
 Virtual 2D-3D Fracture Reduction with Bone Length Recovery Using Statistical Shape Models  (Ondřej Klíma, Roman Madeja, Michal Španel, Martin Čuta, Pavel Zemčík, Pavel Stoklásek et al.)....Pages 207-219
Front Matter ....Pages 221-221
 Deep Shape Analysis on Abdominal Organs for Diabetes Prediction  (Benjamín Gutiérrez-Becker, Sergios Gatidis, Daniel Gutmann, Annette Peters, Christopher Schlett, Fabian Bamberg et al.)....Pages 223-231
 Nonparametric Aggregation of Geodesic Trends for Longitudinal Data Analysis  (Kristen M. Campbell, P. Thomas Fletcher)....Pages 232-243
 DeepSSM: A Deep Learning Framework for Statistical Shape Modeling from Raw Images  (Riddhish Bhalodia, Shireen Y. Elhabian, Ladislav Kavan, Ross T. Whitaker)....Pages 244-257
 Combining Deep Learning and Shape Priors for Bi-Ventricular Segmentation of Volumetric Cardiac Magnetic Resonance Images  (Jinming Duan, Jo Schlemper, Wenjia Bai, Timothy J. W. Dawes, Ghalib Bello, Carlo Biffi et al.)....Pages 258-267
 Deep Learning for Quality Control of Subcortical Brain 3D Shape Models  (Dmitry Petrov, Boris A. Gutman, Egor Kuznetsov, Christopher R. K. Ching, Kathryn Alpert, Artemis Zavaliangos-Petropulu et al.)....Pages 268-276
 Discrimination of Volumetric Shapes Using Orthogonal Tensor Decomposition  (Hayato Itoh, Atsushi Imiya)....Pages 277-290
 Organ-At-Risk Segmentation in Brain MRI Using Model-Based Segmentation: Benefits of Deep Learning-Based Boundary Detectors  (Eliza Orasanu, Tom Brosch, Carri Glide-Hurst, Steffen Renisch)....Pages 291-299
 Uncertainty Quantification in CNN-Based Surface Prediction Using Shape Priors  (Katarína Tóthová, Sarah Parisot, Matthew C. H. Lee, Esther Puyol-Antón, Lisa M. Koch, Andrew P. King et al.)....Pages 300-310
Back Matter ....Pages 311-312