Recent Advances in Parallel Virtual Machine and Message Passing Interface: 12th European PVM/MPI Users’ Group Meeting Sorrento, Italy, September 18-21, 2005. Proceedings

Front Matter....Pages -
New Directions in PVM/Harness Research....Pages 1-3
Towards a Productive MPI Environment....Pages 4-4
Components of Systems Software for Parallel Systems....Pages 5-5
Virtualization in Parallel Distributed Computing....Pages 6-6
Advanced Message Passing and Threading Issues....Pages 7-7
Using MPI-2: A Problem-Based Approach....Pages 8-8
Some Improvements to a Parallel Decomposition Technique for Training Support Vector Machines....Pages 9-17
Nesting OpenMP in MPI to Implement a Hybrid Communication Method of Parallel Simulated Annealing on a Cluster of SMP Nodes....Pages 18-27
Computing Frequent Itemsets in Parallel Using Partial Support Trees....Pages 28-37
A Grid-Aware Branch, Cut and Price Implementation....Pages 38-47
An Optimal Broadcast Algorithm Adapted to SMP Clusters....Pages 48-56
Efficient Implementation of Allreduce on BlueGene/L Collective Network....Pages 57-66
Scalable Fault Tolerant MPI: Extending the Recovery Algorithm....Pages 67-75
Hash Functions for Datatype Signatures in MPI....Pages 76-83
Implementing MPI-IO Shared File Pointers Without File System Support....Pages 84-93
An Efficient Parallel File System for Cluster Grids....Pages 94-101
Cooperative Write-Behind Data Buffering for MPI I/O....Pages 102-109
Hint Controlled Distribution with Parallel File Systems....Pages 110-118
Implementing Byte-Range Locks Using MPI One-Sided Communication....Pages 119-128
An Improved Algorithm for (Non-commutative) Reduce-Scatter with an Application....Pages 129-137
Collective Error Detection for MPI Collective Operations....Pages 138-147
Implementing OpenMP for Clusters on Top of MPI....Pages 148-155
Designing a Common Communication Subsystem....Pages 156-166
Dynamic Interoperable Message Passing....Pages 167-174
Analysis of the Component Architecture Overhead in Open MPI....Pages 175-182
A Case for New MPI Fortran Bindings....Pages 183-190
Design Alternatives and Performance Trade-Offs for Implementing MPI-2 over InfiniBand....Pages 191-199
Designing a Portable MPI-2 over Modern Interconnects Using uDAPL Interface....Pages 200-208
Experiences, Strategies and Challenges in Adapting PVM to VxWorks TM Hard Real-Time Operating System, for Safety-Critical Software....Pages 209-216
MPJ/Ibis: A Flexible and Efficient Message Passing Platform for Java....Pages 217-224
The Open Run-Time Environment (OpenRTE): A Transparent Multi-cluster Environment for High-Performance Computing....Pages 225-232
PVM-3.4.4 + IPv6: Full Grid Connectivity....Pages 233-240
Utilizing PVM in a Multidomain Clusters Environment....Pages 241-249
Enhancements to PVM’s BEOLIN Architecture....Pages 250-257
Migol: A Fault-Tolerant Service Framework for MPI Applications in the Grid....Pages 258-267
Applicability of Generic Naming Services and Fault-Tolerant Metacomputing with FT-MPI....Pages 268-275
A Peer-to-Peer Framework for Robust Execution of Message Passing Parallel Programs on Grids....Pages 276-284
MGF: A Grid-Enabled MPI Library with a Delegation Mechanism to Improve Collective Operations....Pages 285-292
Automatic Performance Analysis of Message Passing Applications Using the KappaPI 2 Tool....Pages 293-300
Benchmarking One-Sided Communication with SKaMPI 5....Pages 301-308
A Scalable Approach to MPI Application Performance Analysis....Pages 309-316
High-Level Application Specific Performance Analysis Using the G-PM Tool....Pages 317-324
ClusterGrind: Valgrinding LAM/MPI Applications....Pages 325-332
MPISH2: Unix Integration for MPI Programs....Pages 333-342
Ensemble-2: Dynamic Composition of MPMD Programs....Pages 343-350
New User-Guided and ckpt -Based Checkpointing Libraries for Parallel MPI Applications,....Pages 351-358
Performance Profiling Overhead Compensation for MPI Programs....Pages 359-367
Network Bandwidth Measurements and Ratio Analysis with the HPC Challenge Benchmark Suite (HPCC)....Pages 368-378
A Space and Time Sharing Scheduling Approach for PVM Non-dedicated Clusters....Pages 379-387
Efficient Hardware Multicast Group Management for Multiple MPI Communicators over InfiniBand....Pages 388-398
Assessing MPI Performance on QsNet II ....Pages 399-406
Optimised Gather Collectives on QsNet II ....Pages 407-414
An Evaluation of Implementation Options for MPI One-Sided Communication....Pages 415-424
A Comparison of Three MPI Implementations for Red Storm....Pages 425-432
Probing the Applicability of Polarizable Force-Field Molecular Dynamics for Parallel Architectures: A Comparison of Digital MPI with LAM-MPI and MPICH2....Pages 433-440
Symmetrical Data Sieving for Noncontiguous I/O Accesses in Molecular Dynamics Simulations....Pages 441-448
Simulation of Ecologic Systems Using MPI....Pages 449-456
Load Balancing and Computing Strategies in Pipeline Optimization for Parallel Visualization of 3D Irregular Meshes....Pages 457-466
An Improved Mechanism for Controlling Portable Computers in Limited Coverage Areas....Pages 467-474
An MPI Implementation for Distributed Signal Processing....Pages 475-482
A Parallel Exponential Integrator for Large-Scale Discretizations of Advection-Diffusion Models....Pages 483-492
Parallel Grid Adaptation and Dynamic Load Balancing for a CFD Solver....Pages 493-501
4 th International Special Session on: Current Trends in Numerical Simulation for Parallel Engineering Environments ParSim 2005....Pages 502-503
Applying Grid Techniques to an Octree-Based CSCW Framework....Pages 504-511
Parallel Modeling of Transient States Analysis in Electrical Circuits....Pages 512-519
The COOLFluiD Parallel Architecture....Pages 520-527
Calculation of Single-File Diffusion Using Grid-Enabled Parallel Generic Cellular Automata Simulation....Pages 528-535
Harnessing High-Performance Computers for Computational Steering....Pages 536-543
Back Matter....Pages -