Prediction of protein structures, functions, and interactions

Front Matter......Page 1
01.pdf......Page 12
The Basics of Protein Sequence Analysis......Page 14
First Steps of Protein Structure Prediction......Page 52
Automated Prediction of Protein Function from Sequence......Page 76
Template Based Prediction of Three-dimensional Protein Structures: Fold Recognition and Comparative Modeling......Page 99
Template-free Predictions of Three-dimensional Protein Structures: From First Principles to Knowledge-based Potentials......Page 129
Quality Assessment of Protein Models......Page 154
Prediction of Molecular Interactions from 3D-structures: From Small Ligands to Large Protein Complexes......Page 169
Structure-based Prediction of Enzymes and Their Active Sites......Page 197
The Prediction of Macromolecular Complexes by Docking......Page 220
Protein Function Prediction via Analysis of Interactomes......Page 240
Integrating Prediction of Structure,Function, and Interactions......Page 268
Index......Page 289