Modeling Populations of Adaptive Individuals

Cover
Title
Copyright
Dedication
Contents
Preface
Acknowledgments
1. Adaptive Individuals and Population Ecology
	1.1 Adaptive Trade-Off Behavior and Ecology
	1.2 Modeling Systems of Adaptive Individuals
	1.3 Adaptive Behavior in Individual-Based Models
	1.4 Adaptive Behavior, Physiology, and Neurobiology
	1.5 What We Need to Link Behavioral and Population Ecology: Across-Level Theory
	1.6 State-and Prediction-Based Theory (SPT)
	1.7 Monograph Objectives and Overview
2. Case Study: Modeling Trout Population Response to River Management
	2.1 Introduction and Model Purpose
	2.2 Adaptive Behavior in the Trout Model: Habitat Selection
	2.3 A Second Adaptive Behavior: Activity Selection
	2.4 Conclusions
3. Introduction to State- and Prediction-Based Theory
	3.1 What Is SPT?
	3.2 Five Steps for Implementing SPT
	3.3 A Look Ahead
4. A First Example: Forager Patch Selection
	4.1 Objectives
	4.2 The Model
	4.3 Results and Comparison of SPT to Dynamic State Variable Modeling
	4.4 Version 2: Foraging with Competition
	4.5 Version 3: Continuous Starvation Risk
	4.6 Conclusions
5. A Second Example: Vertical Migration and Reproductive Effort in Daphnia
	5.1 Objectives
	5.2 The Model
	5.3 SPT Version 1: Expected Future Reproduction with Current Growth and Survival
	5.4 SPT Version 2: Predicted Offspring
	5.5 SPT Version 3: Diurnal Prediction
	5.6 Prediction Complexity and Fitness: Population Simulations
	5.7 Conclusions
6. Example Three: Temporal Patterns in Limpet Foraging
	6.1 Background and Objectives
	6.2 The DSVM Model of Limpet Foraging
	6.3 The Model
	6.4 SPT Version 1: Maximizing Short-Term Expected Energy Reserves
	6.5 SPT Version 2: Maximizing Mean Expected Energy Reserves until Day’s End
	6.6 Conclusions
7. Example Four: Facultative Anadromy in Salmonid Fishes
	7.1 Introduction and Objectives
	7.2 The DSVM Model
	7.3 The IBM Using SPT
	7.4 SPT Model Results and Applications
8. Guidance for Using State- and Prediction-Based Theory
	8.1 Introduction and Objectives
	8.2 Step 1: Defining the Decision That SPT Models
	8.3 Step 2: Selecting Fitness Measures and Time Horizons
	8.4 Step 3: Modeling Prediction of Environmental Conditions and Fitness Elements
		8.4.1 General Guidance on Modeling Prediction
		8.4.2 Predicting Growth and Size
		8.4.3 Predicting Starvation Risk
		8.4.4 Predicting Predation and Other Risks
		8.4.5 Predicting Reproductive Success
	8.5 Step 4: Selecting a Decision Algorithm
	8.6 Step 5: Implementing and Testing the Theory
	8.7 Conclusions
9. Testing and Refining State- and Prediction-Based Theory
	9.1 Introduction and Objectives
	9.2 The Pattern-Oriented Theory Development Cycle
	9.3 Examples of Theory Development and Testing
		9.3.1 Literature Examples
		9.3.2 Trout Habitat Selection
		9.3.3 Activity Selection in Trout
		9.3.4 Foraging Habitat Selection in Songbirds
	9.4 Conclusions
10. Building Model Credibility
	10.1 Introduction and Objectives
	10.2 Issues in “Validation” of Individual-Based Population Models
	10.3 Strategies for Building Credibility
	10.4 Lessons Learned in Field, Laboratory, and Simulation Experiments
	10.5 Conclusions
11. Empirical Research on Populations of Adaptive Individuals
	11.1 Introduction and Objectives
	11.2 Benefits of Models for Field Studies
	11.3 Modeling Phase 1: Formulate the Question
	11.4 Modeling Phase 2: Assemble Hypotheses
	11.5 Modeling Phase 3: Choose Model Structure
	11.6 Modeling Phase 5: Analyze the Model
	11.7 Conclusions
12. Conclusions and Outlook
	12.1 Modeling Populations of Adaptive Individuals
	12.2 Key Characteristics of the Approach
	12.3 Conclusions from Example Models
	12.4 Outlook
References
Index