Medical Image Computing and Computer Assisted Intervention – MICCAI 2018: 21st International Conference, Granada, Spain, September 16-20, 2018, Proceedings, Part IV

Front Matter ....Pages I-XXX
Front Matter ....Pages 1-1
 Uncertainty in Multitask Learning: Joint Representations for Probabilistic MR-only Radiotherapy Planning  (Felix J. S. Bragman, Ryutaro Tanno, Zach Eaton-Rosen, Wenqi Li, David J. Hawkes, Sebastien Ourselin et al.)....Pages 3-11
 A Combined Simulation and Machine Learning Approach for Image-Based Force Classification During Robotized Intravitreal Injections  (Andrea Mendizabal, Tatiana Fountoukidou, Jan Hermann, Raphael Sznitman, Stephane Cotin)....Pages 12-20
 Learning from Noisy Label Statistics: Detecting High Grade Prostate Cancer in Ultrasound Guided Biopsy  (Shekoofeh Azizi, Pingkun Yan, Amir Tahmasebi, Peter Pinto, Bradford Wood, Jin Tae Kwak et al.)....Pages 21-29
 A Feature-Driven Active Framework for Ultrasound-Based Brain Shift Compensation  (Jie Luo, Matthew Toews, Ines Machado, Sarah Frisken, Miaomiao Zhang, Frank Preiswerk et al.)....Pages 30-38
 Soft-Body Registration of Pre-operative 3D Models to Intra-operative RGBD Partial Body Scans  (Richard Modrzejewski, Toby Collins, Adrien Bartoli, Alexandre Hostettler, Jacques Marescaux)....Pages 39-46
 Automatic Classification of Cochlear Implant Electrode Cavity Positioning  (Jack H. Noble, Robert F. Labadie, Benoit M. Dawant)....Pages 47-54
 X-ray-transform Invariant Anatomical Landmark Detection for Pelvic Trauma Surgery  (Bastian Bier, Mathias Unberath, Jan-Nico Zaech, Javad Fotouhi, Mehran Armand, Greg Osgood et al.)....Pages 55-63
 Endoscopic Navigation in the Absence of CT Imaging  (Ayushi Sinha, Xingtong Liu, Austin Reiter, Masaru Ishii, Gregory D. Hager, Russell H. Taylor)....Pages 64-71
 A Novel Mixed Reality Navigation System for Laparoscopy Surgery  (Jagadeesan Jayender, Brian Xavier, Franklin King, Ahmed Hosny, David Black, Steve Pieper et al.)....Pages 72-80
 Respiratory Motion Modelling Using cGANs  (Alina Giger, Robin Sandkühler, Christoph Jud, Grzegorz Bauman, Oliver Bieri, Rares Salomir et al.)....Pages 81-88
 Physics-Based Simulation to Enable Ultrasound Monitoring of HIFU Ablation: An MRI Validation  (Chloé Audigier, Younsu Kim, Nicholas Ellens, Emad M. Boctor)....Pages 89-97
 DeepDRR – A Catalyst for Machine Learning in Fluoroscopy-Guided Procedures  (Mathias Unberath, Jan-Nico Zaech, Sing Chun Lee, Bastian Bier, Javad Fotouhi, Mehran Armand et al.)....Pages 98-106
 Exploiting Partial Structural Symmetry for Patient-Specific Image Augmentation in Trauma Interventions  (Javad Fotouhi, Mathias Unberath, Giacomo Taylor, Arash Ghaani Farashahi, Bastian Bier, Russell H. Taylor et al.)....Pages 107-115
 Intraoperative Brain Shift Compensation Using a Hybrid Mixture Model  (Siming Bayer, Nishant Ravikumar, Maddalena Strumia, Xiaoguang Tong, Ying Gao, Martin Ostermeier et al.)....Pages 116-124
 Video-Based Computer Aided Arthroscopy for Patient Specific Reconstruction of the Anterior Cruciate Ligament  (Carolina Raposo, Cristóvão Sousa, Luis Ribeiro, Rui Melo, João P. Barreto, João Oliveira et al.)....Pages 125-133
 Simultaneous Segmentation and Classification of Bone Surfaces from Ultrasound Using a Multi-feature Guided CNN  (Puyang Wang, Vishal M. Patel, Ilker Hacihaliloglu)....Pages 134-142
 Endoscopic Laser Surface Scanner for Minimally Invasive Abdominal Surgeries  (Jordan Geurten, Wenyao Xia, Uditha Jayarathne, Terry M. Peters, Elvis C. S. Chen)....Pages 143-150
 Deep Adversarial Context-Aware Landmark Detection for Ultrasound Imaging  (Ahmet Tuysuzoglu, Jeremy Tan, Kareem Eissa, Atilla P. Kiraly, Mamadou Diallo, Ali Kamen)....Pages 151-158
 Towards a Fast and Safe LED-Based Photoacoustic Imaging Using Deep Convolutional Neural Network  (Emran Mohammad Abu Anas, Haichong K. Zhang, Jin Kang, Emad M. Boctor)....Pages 159-167
 An Open Framework Enabling Electromagnetic Tracking in Image-Guided Interventions  (Herman Alexander Jaeger, Stephen Hinds, Pádraig Cantillon-Murphy)....Pages 168-175
 Colon Shape Estimation Method for Colonoscope Tracking Using Recurrent Neural Networks  (Masahiro Oda, Holger R. Roth, Takayuki Kitasaka, Kasuhiro Furukawa, Ryoji Miyahara, Yoshiki Hirooka et al.)....Pages 176-184
 Towards Automatic Report Generation in Spine Radiology Using Weakly Supervised Framework  (Zhongyi Han, Benzheng Wei, Stephanie Leung, Jonathan Chung, Shuo Li)....Pages 185-193
Front Matter ....Pages 195-195
 A Natural Language Interface for Dissemination of Reproducible Biomedical Data Science  (Rogers Jeffrey Leo John, Jignesh M. Patel, Andrew L. Alexander, Vikas Singh, Nagesh Adluru)....Pages 197-205
 Spatiotemporal Manifold Prediction Model for Anterior Vertebral Body Growth Modulation Surgery in Idiopathic Scoliosis  (William Mandel, Olivier Turcot, Dejan Knez, Stefan Parent, Samuel Kadoury)....Pages 206-213
 Evaluating Surgical Skills from Kinematic Data Using Convolutional Neural Networks  (Hassan Ismail Fawaz, Germain Forestier, Jonathan Weber, Lhassane Idoumghar, Pierre-Alain Muller)....Pages 214-221
 Needle Tip Force Estimation Using an OCT Fiber and a Fused convGRU-CNN Architecture  (Nils Gessert, Torben Priegnitz, Thore Saathoff, Sven-Thomas Antoni, David Meyer, Moritz Franz Hamann et al.)....Pages 222-229
 Fast GPU Computation of 3D Isothermal Volumes in the Vicinity of Major Blood Vessels for Multiprobe Cryoablation Simulation  (Ehsan Golkar, Pramod P. Rao, Leo Joskowicz, Afshin Gangi, Caroline Essert)....Pages 230-237
 A Machine Learning Approach to Predict Instrument Bending in Stereotactic Neurosurgery  (Alejandro Granados, Matteo Mancini, Sjoerd B. Vos, Oeslle Lucena, Vejay Vakharia, Roman Rodionov et al.)....Pages 238-246
 Deep Reinforcement Learning for Surgical Gesture Segmentation and Classification  (Daochang Liu, Tingting Jiang)....Pages 247-255
 Automated Performance Assessment in Transoesophageal Echocardiography with Convolutional Neural Networks  (Evangelos B. Mazomenos, Kamakshi Bansal, Bruce Martin, Andrew Smith, Susan Wright, Danail Stoyanov)....Pages 256-264
 DeepPhase: Surgical Phase Recognition in CATARACTS Videos  (Odysseas Zisimopoulos, Evangello Flouty, Imanol Luengo, Petros Giataganas, Jean Nehme, Andre Chow et al.)....Pages 265-272
 Surgical Activity Recognition in Robot-Assisted Radical Prostatectomy Using Deep Learning  (Aneeq Zia, Andrew Hung, Irfan Essa, Anthony Jarc)....Pages 273-280
 Unsupervised Learning for Surgical Motion by Learning to Predict the Future  (Robert DiPietro, Gregory D. Hager)....Pages 281-288
Front Matter ....Pages 289-289
 Volumetric Clipping Surface: Un-occluded Visualization of Structures Preserving Depth Cues into Surrounding Organs  (Bhavya Ajani, Aditya Bharadwaj, Karthik Krishnan)....Pages 291-298
 Closing the Calibration Loop: An Inside-Out-Tracking Paradigm for Augmented Reality in Orthopedic Surgery  (Jonas Hajek, Mathias Unberath, Javad Fotouhi, Bastian Bier, Sing Chun Lee, Greg Osgood et al.)....Pages 299-306
 Higher Order of Motion Magnification for Vessel Localisation in Surgical Video  (Mirek Janatka, Ashwin Sridhar, John Kelly, Danail Stoyanov)....Pages 307-314
 Simultaneous Surgical Visibility Assessment, Restoration, and Augmented Stereo Surface Reconstruction for Robotic Prostatectomy  (Xiongbiao Luo, Ying Wan, Hui-Qing Zeng, Yingying Guo, Henry Chidozie Ewurum, Xiao-Bin Zhang et al.)....Pages 315-323
 Real-Time Augmented Reality for Ear Surgery  (Raabid Hussain, Alain Lalande, Roberto Marroquin, Kibrom Berihu Girum, Caroline Guigou, Alexis Bozorg Grayeli)....Pages 324-331
 Framework for Fusion of Data- and Model-Based Approaches for Ultrasound Simulation  (Christine Tanner, Rastislav Starkov, Michael Bajka, Orcun Goksel)....Pages 332-339
Front Matter ....Pages 341-341
 Esophageal Gross Tumor Volume Segmentation Using a 3D Convolutional Neural Network  (Sahar Yousefi, Hessam Sokooti, Mohamed S. Elmahdy, Femke P. Peters, Mohammad T. Manzuri Shalmani, Roel T. Zinkstok et al.)....Pages 343-351
 Deep Learning Based Instance Segmentation in 3D Biomedical Images Using Weak Annotation  (Zhuo Zhao, Lin Yang, Hao Zheng, Ian H. Guldner, Siyuan Zhang, Danny Z. Chen)....Pages 352-360
 Learn the New, Keep the Old: Extending Pretrained Models with New Anatomy and Images  (Firat Ozdemir, Philipp Fuernstahl, Orcun Goksel)....Pages 361-369
 ASDNet: Attention Based Semi-supervised Deep Networks for Medical Image Segmentation  (Dong Nie, Yaozong Gao, Li Wang, Dinggang Shen)....Pages 370-378
 MS-Net: Mixed-Supervision Fully-Convolutional Networks for Full-Resolution Segmentation  (Meet P. Shah, S. N. Merchant, Suyash P. Awate)....Pages 379-387
 How to Exploit Weaknesses in Biomedical Challenge Design and Organization  (Annika Reinke, Matthias Eisenmann, Sinan Onogur, Marko Stankovic, Patrick Scholz, Peter M. Full et al.)....Pages 388-395
 Accurate Weakly-Supervised Deep Lesion Segmentation Using Large-Scale Clinical Annotations: Slice-Propagated 3D Mask Generation from 2D RECIST  (Jinzheng Cai, Youbao Tang, Le Lu, Adam P. Harrison, Ke Yan, Jing Xiao et al.)....Pages 396-404
 Semi-automatic RECIST Labeling on CT Scans with Cascaded Convolutional Neural Networks  (Youbao Tang, Adam P. Harrison, Mohammadhadi Bagheri, Jing Xiao, Ronald M. Summers)....Pages 405-413
Front Matter ....Pages 415-415
 A Multi-scale Pyramid of 3D Fully Convolutional Networks for Abdominal Multi-organ Segmentation  (Holger R. Roth, Chen Shen, Hirohisa Oda, Takaaki Sugino, Masahiro Oda, Yuichiro Hayashi et al.)....Pages 417-425
 3D U-JAPA-Net: Mixture of Convolutional Networks for Abdominal Multi-organ CT Segmentation  (Hideki Kakeya, Toshiyuki Okada, Yukio Oshiro)....Pages 426-433
 Training Multi-organ Segmentation Networks with Sample Selection by Relaxed Upper Confident Bound  (Yan Wang, Yuyin Zhou, Peng Tang, Wei Shen, Elliot K. Fishman, Alan L. Yuille)....Pages 434-442
Front Matter ....Pages 443-443
 Bridging the Gap Between 2D and 3D Organ Segmentation with Volumetric Fusion Net  (Yingda Xia, Lingxi Xie, Fengze Liu, Zhuotun Zhu, Elliot K. Fishman, Alan L. Yuille)....Pages 445-453
 Segmentation of Renal Structures for Image-Guided Surgery  (Junning Li, Pechin Lo, Ahmed Taha, Hang Wu, Tao Zhao)....Pages 454-462
 Kid-Net: Convolution Networks for Kidney Vessels Segmentation from CT-Volumes  (Ahmed Taha, Pechin Lo, Junning Li, Tao Zhao)....Pages 463-471
 Local and Non-local Deep Feature Fusion for Malignancy Characterization of Hepatocellular Carcinoma  (Tianyou Dou, Lijuan Zhang, Hairong Zheng, Wu Zhou)....Pages 472-479
 A Novel Bayesian Model Incorporating Deep Neural Network and Statistical Shape Model for Pancreas Segmentation  (Jingting Ma, Feng Lin, Stefan Wesarg, Marius Erdt)....Pages 480-487
 Fine-Grained Segmentation Using Hierarchical Dilated Neural Networks  (Sihang Zhou, Dong Nie, Ehsan Adeli, Yaozong Gao, Li Wang, Jianping Yin et al.)....Pages 488-496
 Generalizing Deep Models for Ultrasound Image Segmentation  (Xin Yang, Haoran Dou, Ran Li, Xu Wang, Cheng Bian, Shengli Li et al.)....Pages 497-505
 Inter-site Variability in Prostate Segmentation Accuracy Using Deep Learning  (Eli Gibson, Yipeng Hu, Nooshin Ghavami, Hashim U. Ahmed, Caroline Moore, Mark Emberton et al.)....Pages 506-514
 Deep Learning-Based Boundary Detection for Model-Based Segmentation with Application to MR Prostate Segmentation  (Tom Brosch, Jochen Peters, Alexandra Groth, Thomas Stehle, Jürgen Weese)....Pages 515-522
 Deep Attentional Features for Prostate Segmentation in Ultrasound  (Yi Wang, Zijun Deng, Xiaowei Hu, Lei Zhu, Xin Yang, Xuemiao Xu et al.)....Pages 523-530
 Accurate and Robust Segmentation of the Clinical Target Volume for Prostate Brachytherapy  (Davood Karimi, Qi Zeng, Prateek Mathur, Apeksha Avinash, Sara Mahdavi, Ingrid Spadinger et al.)....Pages 531-539
Front Matter ....Pages 541-541
 Hashing-Based Atlas Ranking and Selection for Multiple-Atlas Segmentation  (Amin Katouzian, Hongzhi Wang, Sailesh Conjeti, Hui Tang, Ehsan Dehghan, Alexandros Karargyris et al.)....Pages 543-551
 Corners Detection for Bioresorbable Vascular Scaffolds Segmentation in IVOCT Images  (Linlin Yao, Yihui Cao, Qinhua Jin, Jing Jing, Yundai Chen, Jianan Li et al.)....Pages 552-560
 The Deep Poincaré Map: A Novel Approach for Left Ventricle Segmentation  (Yuanhan Mo, Fangde Liu, Douglas McIlwraith, Guang Yang, Jingqing Zhang, Taigang He et al.)....Pages 561-568
 Bayesian VoxDRN: A Probabilistic Deep Voxelwise Dilated Residual Network for Whole Heart Segmentation from 3D MR Images  (Zenglin Shi, Guodong Zeng, Le Zhang, Xiahai Zhuang, Lei Li, Guang Yang et al.)....Pages 569-577
 Real-Time Prediction of Segmentation Quality  (Robert Robinson, Ozan Oktay, Wenjia Bai, Vanya V. Valindria, Mihir M. Sanghvi, Nay Aung et al.)....Pages 578-585
 Recurrent Neural Networks for Aortic Image Sequence Segmentation with Sparse Annotations  (Wenjia Bai, Hideaki Suzuki, Chen Qin, Giacomo Tarroni, Ozan Oktay, Paul M. Matthews et al.)....Pages 586-594
 Deep Nested Level Sets: Fully Automated Segmentation of Cardiac MR Images in Patients with Pulmonary Hypertension  (Jinming Duan, Jo Schlemper, Wenjia Bai, Timothy J. W. Dawes, Ghalib Bello, Georgia Doumou et al.)....Pages 595-603
 Atrial Fibrosis Quantification Based on Maximum Likelihood Estimator of Multivariate Images  (Fuping Wu, Lei Li, Guang Yang, Tom Wong, Raad Mohiaddin, David Firmin et al.)....Pages 604-612
 Left Ventricle Segmentation via Optical-Flow-Net from Short-Axis Cine MRI: Preserving the Temporal Coherence of Cardiac Motion  (Wenjun Yan, Yuanyuan Wang, Zeju Li, Rob J. van der Geest, Qian Tao)....Pages 613-621
 VoxelAtlasGAN: 3D Left Ventricle Segmentation on Echocardiography with Atlas Guided Generation and Voxel-to-Voxel Discrimination  (Suyu Dong, Gongning Luo, Kuanquan Wang, Shaodong Cao, Ashley Mercado, Olga Shmuilovich et al.)....Pages 622-629
 Domain and Geometry Agnostic CNNs for Left Atrium Segmentation in 3D Ultrasound  (Markus A. Degel, Nassir Navab, Shadi Albarqouni)....Pages 630-637
Front Matter ....Pages 639-639
 Densely Deep Supervised Networks with Threshold Loss for Cancer Detection in Automated Breast Ultrasound  (Na Wang, Cheng Bian, Yi Wang, Min Xu, Chenchen Qin, Xin Yang et al.)....Pages 641-648
 Btrfly Net: Vertebrae Labelling with Energy-Based Adversarial Learning of Local Spine Prior  (Anjany Sekuboyina, Markus Rempfler, Jan Kukačka, Giles Tetteh, Alexander Valentinitsch, Jan S. Kirschke et al.)....Pages 649-657
 AtlasNet: Multi-atlas Non-linear Deep Networks for Medical Image Segmentation  (M. Vakalopoulou, G. Chassagnon, N. Bus, R. Marini, E. I. Zacharaki, M.-P. Revel et al.)....Pages 658-666
 CFCM: Segmentation via Coarse to Fine Context Memory  (Fausto Milletari, Nicola Rieke, Maximilian Baust, Marco Esposito, Nassir Navab)....Pages 667-674
Front Matter ....Pages 675-675
 Pyramid-Based Fully Convolutional Networks for Cell Segmentation  (Tianyi Zhao, Zhaozheng Yin)....Pages 677-685
 Automated Object Tracing for Biomedical Image Segmentation Using a Deep Convolutional Neural Network  (Erica M. Rutter, John H. Lagergren, Kevin B. Flores)....Pages 686-694
 RBC Semantic Segmentation for Sickle Cell Disease Based on Deformable U-Net  (Mo Zhang, Xiang Li, Mengjia Xu, Quanzheng Li)....Pages 695-702
 Accurate Detection of Inner Ears in Head CTs Using a Deep Volume-to-Volume Regression Network with False Positive Suppression and a Shape-Based Constraint  (Dongqing Zhang, Jianing Wang, Jack H. Noble, Benoit M. Dawant)....Pages 703-711
 Automatic Teeth Segmentation in Panoramic X-Ray Images Using a Coupled Shape Model in Combination with a Neural Network  (Andreas Wirtz, Sudesh Ganapati Mirashi, Stefan Wesarg)....Pages 712-719
 Craniomaxillofacial Bony Structures Segmentation from MRI with Deep-Supervision Adversarial Learning  (Miaoyun Zhao, Li Wang, Jiawei Chen, Dong Nie, Yulai Cong, Sahar Ahmad et al.)....Pages 720-727
 Automatic Skin Lesion Segmentation on Dermoscopic Images by the Means of Superpixel Merging  (Diego Patiño, Jonathan Avendaño, John W. Branch)....Pages 728-736
 Star Shape Prior in Fully Convolutional Networks for Skin Lesion Segmentation  (Zahra Mirikharaji, Ghassan Hamarneh)....Pages 737-745
 Fast Vessel Segmentation and Tracking in Ultra High-Frequency Ultrasound Images  (Tejas Sudharshan Mathai, Lingbo Jin, Vijay Gorantla, John Galeotti)....Pages 746-754
 Deep Reinforcement Learning for Vessel Centerline Tracing in Multi-modality 3D Volumes  (Pengyue Zhang, Fusheng Wang, Yefeng Zheng)....Pages 755-763
Back Matter ....Pages 765-770