Macromolecular Crystallography Part B

Content: 
Contributors to volume 277
Pages ix-xi

Preface
Pages xiii-xv
Charles W. Carter Jr., Robert M. Sweet

Volumes in series
Pages xvii-xxxiii

[1] Shake-and-bake: An algorithm for automatic solution ab initio of crystal structures Original Research Article
Pages 3-13
Herbert A. Hauptman

[2] Ab initio macromolecular phasing: Blueprint for an expert system based on structure factor statistics with built-in stereochemistry Original Research Article
Pages 14-18
GГ©rard Bricogne

[3] Noncrystallographic symmetry averaging in phase refinement and extension Original Research Article
Pages 18-53
F.M.D. Vellieux, Randy J. Read

[4] Combining constraints for electron-density modification Original Research Article
Pages 53-64
Kam Y.J. Zhang, Kevin Cowtan, Peter Main

[5] MICE computer program Original Research Article
Pages 65-78
Christopher J. Gilmore, GГ©rard Bricogne

[6] Phase improvement using conditional probability methods: Maximum entropy solvent flattening and phase permutation Original Research Article
Pages 79-109
Charles W. Carter Jr., Shibin Xiang

[7] Model phases: Probabilities and bias Original Research Article
Pages 110-128
Randy J. Read

[8] Critical-point analysis in protein electron-density map interpretation Original Research Article
Pages 131-157
Suzanne Fortier, Antony Chiverton, Janice Glasgow, Laurence Leherte

[9] CHAIN: A crystallographic modeling program Original Research Article
Pages 158-173
John S. Sack, Florante A. Quiocho

[10] Electron-density map interpretation Original Research Article
Pages 173-208
T.A. Jones, M. Kjeldgaard

[11] Model building and refinement practice Original Research Article
Pages 208-230
Gerard J. Kleywegt, T. Alwyn Jones

[12] LORE: Exploiting database of known structures Original Research Article
Pages 230-242
Barry C. Finzel

[13] Crystallographic refinement by simulated annealing: Methods and applications Original Research Article
Pages 243-269
Axel T. BrГјnger, Luke M. Rice

[14] Automated refinement for protein crystallography Original Research Article
Pages 269-305
Victor S. Lamzin, Keith S. Wilson

[15] TNT refinement package Original Research Article
Pages 306-319
Dale E. Tronrud

[16] SHELXL: High-resolution refinement Original Research Article
Pages 319-343
George M. Sheldrick, Thomas R. Schneider

[17] Modeling and refinement of water molecules and disordered solvent Original Research Article
Pages 344-352
John Badger

[18] Refinement and reliability of macromolecular models based on X-ray diffraction data Original Research Article
Pages 353-366
Lyle H. Jensen

[19] Free R value: Cross-validation in crystallography Original Research Article
Pages 366-396
Axel T. BrГјnger

[20] VERIFY3D: Assessment of protein models with three-dimensional profiles Original Research Article
Pages 396-404
David Eisenberg, Roland LГјthy, James U. Bowie

[21] Analysis of diffuse scattering and relation to molecular motion Original Research Article
Pages 407-432
James B. Clarage, George N. Phillips Jr.

[22] Laue diffraction Original Research Article
Pages 433-447
Keith Moffat

[23] Evaluation of Laue diffraction patterns Original Research Article
Pages 448-467
I.J. Clifton, E.M.H. Duke, S. Wakatsuki, Z. Ren

[24] Triggering methods in crystallographic enzyme kinetics Original Research Article
Pages 467-490
Ilme Schlichting, Roger S. Goody

[25] Ribbons Original Research Article
Pages 493-502,IN1-IN2,503-505
Mike Carson

[26] Raster3D: Photorealistic molecular graphics Original Research Article
Pages 505-524
Ethan A. Merritt, David J. Bacon

[27] Detecting folding motifs and similarities in protein structures Original Research Article
Pages 525-545
Gerard J. Kleywegt, T. Alwyn Jones

[28] Biological macromolecule crystallization database Original Research Article
Pages 546-556
Gary L. Gilliland

[29] Protein data bank archives of three-dimensional macromolecular structures Original Research Article
Pages 556-571
Enrique E. Abola, Joel L. Sussman, Jaime Prilusky, Nancy O. Manning

[30] Macromolecular crystallographic information file Original Research Article
Pages 571-590
Philip E. Bourne, Helen M. Berman, Brian McMahon, Keith D. Watenpaugh, John D. Westbrook, Paula M.D. Fitzgerald

[31] PHASES-95: A program package for processing and analyzing diffraction data from macromolecules Original Research Article
Pages 590-608,IN3,609-620
W. Furey, S. Swaminathan

[32] Collaborative computational project, number 4: Providing programs for protein crystallography Original Research Article
Pages 620-633
Eleanor J. Dodson, Martyn Winn, Adam Ralph

Author index
Pages 635-650

Subject index
Pages 651-664