Introduction to Systems Biology: Workbook for Flipped-Classroom Teaching

Authors
Overview
Planning
Learning
Learning checklist
Further reading
References
Lecture summary
	color2  Biological networks and graph theory
	color2  Modeling of metabolic networks
Basics of Mathematics
	color2  Linear algebra
References
Exercises
Solutions  color2Do not betray yourself!
Lecture summary
	color2  Stoichiometric Network Analysis
	color2  Integration of experimental data
	color2  Constraint-Based Modeling
	color2  Problems & discussion
	color2  Metabolic Flux Analysis
References
Exercises
Solutions  color2Do not betray yourself!
Lecture summary
	color2  Examples of non-linear dynamics
	color2  The impact of network motifs
	color2  What is a system?
	color2  How to describe change mathematically
	color2  What is a steady state?
	color2  Stability theory: Idle state or explosion
	color2  Phase portrait: How elements relate to each other
	color2  Feedback revisited
	color2  Bifurcation: Split it baby!
	color2  Simulation-based analysis of motifs
	color2  Additional reading: Cybernetics—The art of creating equilibrium in a world of constraints and possibilities
Basics of mathematics
References
Exercises
Solutions  color2Do not betray yourself!
Lecture summary
	color2  What is a model?
	color2  Modeling procedure
	color2  Mathematical analysis of models
	color2  Model classification
	color2  Akaike Information Criterion
	color2  Extensive properties & SI units
	color2  Balancing
	color2  Enzyme kinetics
Basics of Mathematics
References
Exercises
Solutions  color2Do not betray yourself!
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