Farm animal proteomics 2013: Proceedings of the 4th Management Committee Meeting and 3rd Meeting of Working Groups 1, 2 & 3 of COST Action FA1002 Kosice, Slovakia 25-26 April 2013

Front Matter....Pages 1-15
Front Matter....Pages 17-17
Mining deeper into the proteome: pros and cons of pre-fractionation and depletion....Pages 19-20
Detection and annotation of common post-translational modifications in mass spectrometry data....Pages 21-22
Applied bioinformatics in the structural, post-genomic era....Pages 23-25
PTMomics – a potpourri of experimental approaches....Pages 26-26
Gel-free quantitative proteomics approaches, current status....Pages 27-27
New proteomics strategies applied to clinical studies....Pages 28-29
Neuro-immune proteomic crosstalk in health and disease: partners in love, partners in divorce....Pages 30-30
Top-down proteomics: 2D gels are an integral part of the process....Pages 31-33
MALDI imaging mass spectrometry: applications, limitations and potential....Pages 34-35
Parasite- and host-derived proteins involved in African trypanosome brain invasion and dysfunction....Pages 36-36
Proteomics at the host: pathogen interface....Pages 37-37
Microbial proteomics in food safety and animal welfare....Pages 38-39
The search of stress markers in porcine by using proteomics....Pages 40-42
Quest for biomarkers of the lean-to-fat ratio by proteomics in beef production....Pages 43-44
The LEXSY platform for recombinant protein expression....Pages 45-48
Front Matter....Pages 49-49
Data-independent acquisition strategies for quantitative proteomics....Pages 51-54
Small intestinal response to enterotoxigenic Escherichia coli infection in pigs as revealed by label free UPLC/MS E proteomics....Pages 55-58
Rapid protein production of Atlantic Salmon, Salmo salar , serum amyloid A (SAA) in an inducible Leishmania tarentolae expression system....Pages 59-62
Proteomic profiling of cerebrospinal fluid in canine degenerative myelopathy....Pages 63-66
Automatic prediction of PTMs in Ehrlichia ruminantium – creating new datasets for Quickmod analyses....Pages 67-70
Front Matter....Pages 49-49
Tandem mass spectrometry for species recognition and phenotyping in fish....Pages 71-74
MALDI imaging mass spectrometry of ageing and osteoarthritic cartilage....Pages 75-78
Protein expression in bovine mononuclear cells after stimulation with lipopolysaccharides and lipoteichoic acid: a proteomic approach....Pages 79-83
The ‘hidden’ proteome of cow’s and Jennys’ milk as revealed by combinatorial peptide ligand libraries....Pages 84-88
Comparison between Coomassie Blue and Silver staining in porcine saliva samples for proteomics: technical considerations: a preliminary experiment....Pages 89-92
Isoelectric focusing in characterisation of alkaline phosphatase isozyme from bovine nasal secretion and mucosa....Pages 93-96
Front Matter....Pages 97-97
PilE4 may contributes in the adhesion of Francisella to brain microvascular endothelial cells....Pages 99-102
Comparative proteomics analysis of campylobacteriosis in human and swine: a study of intestine epithelial cell response to bacterial infection....Pages 103-106
Identification of amino acid residues of OspA of Borrelia involved in binding to CD40 receptor....Pages 107-111
Omics approaches to study the Rickettsia Ehrlichia ruminantium : towards improved knowledge on Heartwater disease....Pages 112-115
Detection of Salmonella antigens expressed in swine gut by hydrophobic antigen tissue triton extraction (HATTREX)....Pages 116-119
New approaches in the diagnosis and treatment of endotoxemia in calves: proteomic investigation and effects of intravenous choline administration....Pages 120-123
Changes on bovine aorta endothelial cells (BAE) proteome upon infection with the rickettsia Ehrlichia ruminantium ....Pages 124-127
Effect of Staphylococcus aureus infection on fibrinogen and plasma protein concentrations in experimentally obese rabbits....Pages 128-131
 Trypanosoma brucei brucei binds human complement regulatory protein C4BP....Pages 132-134
A proteomic analysis of canine serum during the course of babesiosis....Pages 135-138
The acute phase reaction in goats after experimentally induced E. coli mastitis: a proteomic approach....Pages 139-142
The effect of microbial challenge on the intestinal proteome of broiler chickens....Pages 143-146
2D DIGE comparative analysis of Escherichia coli strains with induced resistance to enrofloxacin....Pages 147-150
 In situ assessment of differential adhesion of neuroinvasive and non-neuroinvasive Borrelia strains to BMECs....Pages 151-154
Front Matter....Pages 97-97
Caecal IEL, blood lymphocytes and intestinal mucin study in chickens after probiotic prevention and S. Enteritidis infection....Pages 155-158
Bovine anaplasmosis: IgG2 reactivity in vaccinated cattle against conserved recombinant outer membrane proteins....Pages 159-162
Identification BMECs receptors interacting with Trypanosoma brucei brucei ....Pages 163-166
Effect of short-time overweight gain on the plasma PON1 activity after acute Staphylococcus aureus infection in rabbits....Pages 167-171
Front Matter....Pages 173-173
Biomarkers of winter disease in gilthead seabream: a proteomics approach....Pages 175-178
The absorption of colostral proteins in newborn lambs: an iTRAQ proteomics study....Pages 179-183
Plasma proteome profiles predict diet-induced metabolic syndrome and the early onset of metabolic syndrome in a pig model....Pages 184-187
Changes in protein abundance in the vertebral columnof Atlantic salmon ( Salmosalar ) fed variable dietary P levels....Pages 188-191
Neurotransmitter levels and proteomic approach in pig brain: pre-slaughter handling stress and cognitive biases....Pages 192-195
The sheep ( Ovis aries ) mammary gland mitochondrial complexes: establishment of a Blue-Native PAGE separation method as a model for other ruminant species....Pages 196-198
Bitter taste in water-buffalo ( Bubalus bubalis ): from T2R gene identification to expression studies....Pages 199-203
Seasonal weight loss in dairy goats from the Canary Islands: towards an integrated omics approach?....Pages 204-208
Analysis of endogenous and recombinant bovine somatotropin in serum....Pages 209-212
Investigation of salivary acute phase proteins in calves....Pages 213-216
Targeted proteomics as a tool for porcine acute phase proteins measurements....Pages 217-220
LC-MS/MS analyses of visceral and subcutaneous adipose tissue proteomes in goats....Pages 221-225
Comparison of the patterns of milk serum proteins in subclinical mastitis caused by four common pathogens in dairy cows....Pages 226-229
Intrauterine treated lambs as a model for the study of Intrauterine Growth Restriction (IUGR) and consequent metabolic disorders....Pages 230-233
Effect of estradiol on biochemical bone metabolism markers in dairy cows....Pages 234-237
Dynamics of metabolic and oxidative stress parameters in dairy heifers during transition period....Pages 238-241
Front Matter....Pages 173-173
The proteomics of wool follicles....Pages 242-244
Relationships between mediators of the acute phase response and altered energetic metabolism in dairy cows after calving....Pages 245-248
Serum protein electrophoretic pattern in clinically healthy calves and cows....Pages 249-252
Front Matter....Pages 253-253
A mass spectrometric scoring system for oxidative damage in dairy foods....Pages 255-257
Shotgun proteomics in blue mussels exposed to benthic trawler-induced sediment resuspension from a polluted fjord....Pages 258-261
Milk and cheese microbiome for safety and quality of dairy products....Pages 262-265
Molecular characterization of Maltese honey: diastase and proline levels changes in Maltese honey seasons....Pages 266-269
Untargeted metabolomic analyses open new scenarios in post mortem pig muscles: Casertana and Large White....Pages 270-273
The role of salt in dry cured ham processing characterized by LC-MS/MS-based proteomics....Pages 274-277
Proteolytic action of caspases 3 and 7 on the hydrolysis of bovine and porcine muscle myofibrillar proteins....Pages 278-281
Allergen characterization in Mediterranean farmed fish: a proteomic approach....Pages 282-286
Protein exudation from salted meat in processing by cold tumbling....Pages 287-289
Peptidomics in extended shelf life dairy products, for assessment of proteolysis and product quality....Pages 290-294
Egg proteome: the protein and carotenoids characteristics deriving from laying hens reared in different housing systems and under different environmental conditions....Pages 295-297
Proteomics and transcriptomics investigation on longissimus muscles in Large White and Casertana pig breeds....Pages 298-301
Back Matter....Pages 303-304