Energetics of Biological Macromolecules

Content: 
Contributors to volume 259
Pages xi-xiii

Preface
Pages xv-xvi
Michael L. Johnson, Gary K. Ackers

Volumes in series
Pages xvii-xxxi

[1] Pathway of allosteric control as revealed by intermediate states of hemoglobin Original Research Article
Pages 1-19
Jo M. Holt, Gary K. Ackers

[2] Probes of energy transduction in enzyme catalysis Original Research Article
Pages 19-43
Yingwen Huang, D.W. Bolen

[3] Macromolecules and water: Probing with osmotic stress Original Research Article
Pages 43-94
V.Adrian Parsegian, R.Peter Rand, Donald C. Rau

[4] Linkage of protein assembly to protein-DNA binding Original Research Article
Pages 95-127
Isaac Wong, Timothy M. Lohman

[5] Linkage at steady state: Allosteric transitions of thrombin Original Research Article
Pages 127-144
Enrico Di Cera, Quoc D. Dang, Youhna Ayala, Alessandro Vindigni

[6] Thermal denaturation methods in the study of protein folding Original Research Article
Pages 144-168
Ernesto Freire

[7] Kinetics of lipid membrane phase transitions: A volume perturbation calorimeter study Original Research Article
Pages 169-182
Lubin Chen, Rodney L. Biltonen, Michael L. Johnson

[8] Tight binding affinities determined from thermodynamic linkage to protons by titration calorimetry Original Research Article
Pages 183-194
Michael L. Doyle, Godfrey Louie, Paul R. Dal Monte, Theodore D. Sokoloski

[9] Calorimetric methods for interpreting protein—Ligand interactions Original Research Article
Pages 194-221
Harvey F. Fisher, Narinder Singh

[10] Extracting thermodynamic data from equilibrium melting curves for oligonucleotide order-disorder transitions Original Research Article
Pages 221-242
Kenneth J. Breslauer

[11] Predicting thermodynamic properties of RNA Original Research Article
Pages 242-261
Martin J. Serra, Douglas H. Turner

[12] Thermodynamics and mutations in RNA—Protein interactions Original Research Article
Pages 261-281
Kathleen B. Hall, James K. Kranz

[13] Melting studies of RNA unfolding and RNA—Ligand interactions Original Research Article
Pages 281-305
David E. Draper, Thomas C. Gluick

[14] Structural-perturbation approaches to thermodynamics of site-specific protein—DNA interactions Original Research Article
Pages 305-344
Linda Jen-Jacobson

[15] Thermodynamic parameters from hydrogen exchange measurements Original Research Article
Pages 344-356
Yawen Bai, Joan J. Englander, Leland Mayne, John S. Milne, S.Walter Englander

[16] Application of pressure to biochemical equilibria: The other thermodynamic variable Original Research Article
Pages 357-377
Catherine A. Royer

[17] Molecular volume Original Research Article
Pages 377-395
Lorraine M. Rellick, Wayne J. Becktel

[18] Hydrostatic and osmotic pressure as tools to study macromolecular recognition Original Research Article
Pages 395-427
Clifford R. Robinson, Stephen G. Sligar

[19] Sedimentation equilibrium as thermodynamic tool Original Research Article
Pages 427-452
Thomas M. Laue

[20] Footprint phenotypes: Structural models of DNA-binding proteins from chemical modification analysis of DNA Original Research Article
Pages 452-468
Jie Yang, Jannette Carey

[21] Low-temperature electrophoresis methods Original Research Article
Pages 468-487
Michele Perrella, Ilya Denisov

[22] Use of multiple spectroscopic methods to monitor equilibrium unfolding of proteins Original Research Article
Pages 487-512
Maurice R. Eftink

[23] Probing structural and physical basis of protein energetics linked to protons and salt Original Research Article
Pages 512-538
E. Bertrand GarcГ­a-Moreno

[24] Evaluating contribution of hydrogen bonding and hydrophobic bonding to protein folding Original Research Article
Pages 538-554
C.N. Pace

[25] Analyzing solvent reorganization and hydrophobicity Original Research Article
Pages 555-576
B. Lee

[26] Simple force field for study of peptide and protein conformational properties Original Research Article
Pages 576-589
Trevor P. Creamer, George D. Rose

[27] Probes for analysis of stability of different variants of aspartate aminotransferase Original Research Article
Pages 590-608
Marino Martinez-Carrion, Antonio Artigues, Alan Berezov, Maria L. Bianconi, Alejandro M. Reyes, Ana Iriarte

[28] Thermodynamic approaches to understanding aspartate transcarbamylase Original Research Article
Pages 608-628
Norma M. Allewell, Vince J. Licata

[29] On the interpretation of data from isothermal processes Original Research Article
Pages 628-720
Rufus Lumry

Author index
Pages 721-744

Subject index
Pages 745-761