Analysis of Amino Acid Sequences

Content: 
Preface
Pages xi-xv
Peer V Bork

Mass spectrometric analysis of proteins Review Article
Pages 1-30
Matthias Wilm

Protein sequence databases Review Article
Pages 31-71
Rolf Apweiler

Amino acid substitution matrices Review Article
Pages 73-97
Steven Henikoff, Jorja G Henikoff

Amino acid-based phylogeny and alignment Review Article
Pages 99-135
Desmond Ghiggins

Searching databases to find protein domain organization Review Article
Pages 137-157
Alex Bateman, Ewan Birney

Identifying nature's protein lego set Review Article
Pages 159-183
Sudeshna Das, Temple F Smith

Evolution of domain families Review Article
Pages 185-244
Chris P Ponting, Jörg Schultz, Richard R Copley, Miguel A Andrade, Peer Bork

Protein fold recognition using sequence profiles and its application in structural genomics Review Article
Pages 245-275
Eugene V Koonin, Yuri I Wolf, L Aravind

Protein sorting signals and prediction of subcellular localization Review Article
Pages 277-344
Kenta Nakai

Gene and context: Integrative approaches to genome analysis Review Article
Pages 345-379
Martijn A Huynen, Berend Snel

Pathway databases and higher order function Review Article
Pages 381-408
Minoru Kanehisa

Individual variation in protein-coding sequences of human genome Review Article
Pages 409-437
Shamil Sunyaev, Jens Hanke, David Brett, Atakan Aydin, Inga Zastrow, Warren Lathe, Peer Bork, Jens Reich

Author index
Pages 439-465

Subject index
Pages 467-481